24-26 November 2021
Online
Australia/Sydney timezone

Tomographic X-ray phase and attenuation extraction for a sample composed of unknown materials

26 Nov 2021, 11:05
15m
Online

Online

Oral Instruments & Techniques Instruments & Techniques

Speaker

Samantha Alloo

Description

Propagation-based phase-contrast X-ray imaging (PB-PCXI) is a technique suitable for imaging weakly-attenuating objects, e.g., biological samples, as it utilizes both attenuation and refraction effects. Such effects are material dependent, and described by the X-ray’s complex refractive index n=1-δ+iβ, where β and δ describe attenuation, and refraction, respectively. Phase retrieval algorithms are typically applied to PB-PCXI images to recover lost phase information. A single-material reconstruction, based on the transport-of-intensity equation, has been published by Paganin et al. [1] and has proven useful in diverse fields. This approach has been extended to consider multi-material objects [2], and partially-coherent X-ray sources [3]. The described phase-retrieval algorithms can successfully recover the projected-phase information of an object, however, they require a priori knowledge of the sample materials. We present an algorithm capable of extracting β and δ functions for a sample that is composed of unknown materials. The essence of the approach is based on curve-fitting an error-function to each interface between distinct materials in a computed tomographic reconstruction [4], where the fit parameters are then used to calculate δ and β for composite materials. This approach requires no a priori sample information, making it broadly applicable, particularly in cases where exact sample composition is unknown. We have applied this method to a breast-tissue sample, where the δ for composite materials was calculated to 0.6% - 2.5% accuracy, compared to theoretical values.

  1. D. M. Paganin et al., J.Microsc. 206, 33 (2002)
  2. M. A. Beltran et al., Opt.Express 18, 6423 (2010)
  3. M. A. Beltran et al., J.Opt. 20, 055605 (2018)
  4. D. A. Thompson et al., J.Synchrotron.Radiat. 26, 825-838 (2019)
Level of Expertise Student
Students Only - Are you interested in AINSE student funding Yes
Which facility did you use for your research Australian Synchrotron
Pronouns She/Her
Presenter Gender Woman
Condition of submission Yes
Do you wish to take part in the Student Poster Slam Yes

Primary author

Samantha Alloo

Co-authors

David Paganin (School of Physics and Astronomy, Monash University) Kaye Morgan (Monash University) TImur Gureyev (the University of Melbourne) Sherry Mayo (CSIRO) Dr Sara Mohammadi (Elettra-Sincrotrone Trieste, Trieste, Italy) Darren Lockie Dr Ralf Hendrik Menk (Elettra-Sincrotrone Trieste, Trieste, Italy) Fulvia Arfelli (University of Trieste and INFN) Prof. Fabrizio Zanconati (Department of Medical Science-Unit of Pathology, University of Trieste, Trieste, Italy) Giuliana Tromba (Elettra - Sincrotrone Trieste) Konstantin Pavlov

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